Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pduA_2Propanediol utilization protein PduA. (124 aa)    
Predicted Functional Partners:
ccmL
Carbon dioxide concentrating mechanism protein CcmL.
 
 
 
 0.979
hscA
Chaperone protein HscA.
 
  
 0.896
sucD
Succinate-semialdehyde dehydrogenase (acetylating).
 
   
 0.861
ACWI_25710
BMC domain protein.
 
   
 0.844
ACWI_25600
Dehydratase medium subunit.
  
  
 0.795
ddrA
Diol dehydratase-reactivating factor alpha subunit.
     
 0.787
pduL_2
Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
  
 0.776
pduU
Propanediol utilization protein PduU.
 
  
 0.775
pduB
Propanediol utilization protein PduB.
 
  
 0.730
pduE
Propanediol dehydratase small subunit.
  
  
 0.718
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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