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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheY_3Chemotaxis protein CheY. (120 aa)    
Predicted Functional Partners:
fliN
Flagellar motor switch protein FliN.
 
 
 0.995
fliM
Flagellar motor switch protein FliM.
 
 
 0.982
cheC
CheY-P phosphatase CheC.
 
 
 0.982
cheD_1
Chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
 
 0.963
ACWI_26340
Putative bifunctional flagellar biosynthesis protein FliO/FliP.
  
  
 0.950
barA_2
Signal transduction histidine-protein kinase BarA.
 
 0.947
ydaM_4
Putative diguanylate cyclase YdaM.
  
 0.944
barA_1
Signal transduction histidine-protein kinase BarA.
 
 0.944
cheA_1
Chemotaxis protein CheA.
 
 0.933
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
  
 0.932
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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