STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_27410VRR-NUC domain protein. (95 aa)    
Predicted Functional Partners:
ACWI_27420
Virulence-associated protein E.
 
     0.904
ACWI_27430
Hypothetical protein.
 
     0.889
polA_3
DNA polymerase I, thermostable.
 
     0.881
ACWI_27480
Hypothetical protein.
 
     0.873
ACWI_27490
PD-(D/E)XK nuclease superfamily protein.
 
     0.873
ACWI_27500
Hypothetical protein.
 
     0.867
rapA
RNA polymerase-associated protein RapA.
 
     0.843
ACWI_27400
Hypothetical protein.
       0.791
ACWI_33960
Sigma-70, region 4.
 
     0.775
ACWI_33870
Hypothetical protein.
 
     0.757
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.