Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACWI_27770Hypothetical protein. (593 aa)    
Predicted Functional Partners:
ACWI_27780
5'-nucleotidase.
     
 0.784
purL
Phosphoribosylformylglycinamidine synthase.
  
  
 0.740
aspA
Aspartate ammonia-lyase.
   
  
 0.625
rbr1
Rubrerythrin-1.
     
 0.589
gap
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.527
ACWI_15170
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.527
sucD
Succinate-semialdehyde dehydrogenase (acetylating).
  
  
 0.507
ndk
Nucleoside diphosphate kinase; Belongs to the NDK family.
  
    0.506
pksJ
Polyketide synthase PksJ.
  
  
 0.486
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.478
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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