Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACWI_27920 | dhaK_3 | ACWI_27920 | ACWI_27930 | Hypothetical protein. | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | 0.656 |
ACWI_27920 | dhaL_2 | ACWI_27920 | ACWI_27910 | Hypothetical protein. | PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL. | 0.730 |
ACWI_27920 | lsrF | ACWI_27920 | ACWI_27940 | Hypothetical protein. | Putative aldolase LsrF. | 0.682 |
ACWI_27920 | sorC_3 | ACWI_27920 | ACWI_27900 | Hypothetical protein. | Sorbitol operon regulator. | 0.468 |
dhaD | dhaK_1 | ACWI_08160 | ACWI_05130 | Glycerol dehydrogenase. | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | 0.765 |
dhaD | dhaK_2 | ACWI_08160 | ACWI_27840 | Glycerol dehydrogenase. | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | 0.696 |
dhaD | dhaK_3 | ACWI_08160 | ACWI_27930 | Glycerol dehydrogenase. | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | 0.696 |
dhaD | dhaK_4 | ACWI_08160 | ACWI_34140 | Glycerol dehydrogenase. | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | 0.765 |
dhaD | dhaL_2 | ACWI_08160 | ACWI_27910 | Glycerol dehydrogenase. | PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL. | 0.636 |
dhaD | dhaM_1 | ACWI_08160 | ACWI_05150 | Glycerol dehydrogenase. | PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM. | 0.760 |
dhaD | dhaM_2 | ACWI_08160 | ACWI_34130 | Glycerol dehydrogenase. | PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM. | 0.760 |
dhaD | sorC_3 | ACWI_08160 | ACWI_27900 | Glycerol dehydrogenase. | Sorbitol operon regulator. | 0.479 |
dhaK_1 | dhaD | ACWI_05130 | ACWI_08160 | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | Glycerol dehydrogenase. | 0.765 |
dhaK_1 | dhaK_2 | ACWI_05130 | ACWI_27840 | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | 0.684 |
dhaK_1 | dhaK_3 | ACWI_05130 | ACWI_27930 | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | 0.680 |
dhaK_1 | dhaK_4 | ACWI_05130 | ACWI_34140 | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | 0.733 |
dhaK_1 | dhaL_2 | ACWI_05130 | ACWI_27910 | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL. | 0.949 |
dhaK_1 | dhaM_1 | ACWI_05130 | ACWI_05150 | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM. | 0.991 |
dhaK_1 | dhaM_2 | ACWI_05130 | ACWI_34130 | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM. | 0.984 |
dhaK_1 | lsrF | ACWI_05130 | ACWI_27940 | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. | Putative aldolase LsrF. | 0.420 |
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