STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_28670Hypothetical protein. (185 aa)    
Predicted Functional Partners:
nasF
uroporphyrinogen-III C-methyltransferase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
 0.934
ACWI_28660
Hypothetical protein.
      0.933
ACWI_26670
Hypothetical protein.
  
 
 0.652
gltB_1
Ferredoxin-dependent glutamate synthase 1.
    
 0.534
mgrA
HTH-type transcriptional regulator MgrA.
       0.425
yecS_2
Inner membrane amino-acid ABC transporter permease protein YecS.
  
 
  0.405
glnP_2
Glutamine transport system permease protein GlnP.
  
 
  0.405
glnH
Glutamine-binding periplasmic protein precursor.
  
 
  0.405
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.