Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_28700Arylesterase precursor. (191 aa)    
Predicted Functional Partners:
draG
ADP-ribosyl-[dinitrogen reductase] glycohydrolase.
       0.714
ACWI_18330
Hypothetical protein.
   
 
 0.639
ACWI_25720
Hypothetical protein.
   
 
 0.639
pksJ
Polyketide synthase PksJ.
     
 0.608
ACWI_33660
Prophage endopeptidase tail.
   
 
 0.573
ACWI_13670
Clostridial hydrophobic W.
  
 
 0.522
ACWI_14330
Hypothetical protein.
  
 
 0.522
ACWI_24910
Y_Y_Y domain protein.
  
 
   0.505
tap_22
Methyl-accepting chemotaxis protein IV.
       0.481
ACWI_28680
Hypothetical protein.
       0.466
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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