STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_29520Bacterial type II secretion system protein F domain protein. (304 aa)    
Predicted Functional Partners:
ACWI_29560
SAF domain protein.
 
  
 0.974
ACWI_29530
Bacterial type II secretion system protein F domain protein.
  
0.969
ACWI_29540
Putative conjugal transfer proteinc.
 
  
 0.966
ACWI_29510
Hypothetical protein.
 
     0.959
ACWI_29580
TadE-like protein.
 
    0.943
ACWI_29570
Hypothetical protein.
 
    0.942
minD_1
Septum site-determining protein MinD.
 
  
 0.917
ptlH
Type IV secretion system protein PtlH.
 
  
 0.911
ACWI_10020
Hypothetical protein.
  
  
 0.832
ACWI_29500
Hypothetical protein.
       0.699
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.