STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_29630Type IV leader peptidase family protein. (225 aa)    
Predicted Functional Partners:
ACWI_27980
ComEC family competence protein.
  
  
 0.755
comEA
ComE operon protein 1.
   
  
 0.671
ACWI_21320
Hypothetical protein.
  
  
 0.635
ACWI_29470
Hypothetical protein.
  
  
 0.635
ACWI_29620
Flp/Fap pilin component.
       0.624
gspE
Putative type II secretion system protein E.
  
 
 0.510
epsE_2
Type II secretion system protein E.
  
 
 0.510
ACWI_29610
Flp/Fap pilin component.
       0.510
epsF_1
Type II secretion system protein F.
  
  
 0.497
epsF_2
Type II secretion system protein F.
  
  
 0.497
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.