ybeY protein (Acetobacterium wieringae) - STRING interaction network

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ybeY

Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (155 aa)

Predicted Functional Partners:

era_3

0.993

dgkA

0.928

pksJ

0.921

rplQ

0.888

rplX

0.823

rpsQ

0.816

rplU

0.808

rplM

0.798

rplK

0.792

rplO

0.789

Your Current Organism:

Acetobacterium wieringae

NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
dgkA	era_3	ACWI_29710	ACWI_29700	Undecaprenol kinase.	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.844
dgkA	pksJ	ACWI_29710	ACWI_26840	Undecaprenol kinase.	Polyketide synthase PksJ.	0.468
dgkA	ybeY	ACWI_29710	ACWI_29720	Undecaprenol kinase.	Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.928
era_3	dgkA	ACWI_29700	ACWI_29710	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Undecaprenol kinase.	0.844
era_3	pksJ	ACWI_29700	ACWI_26840	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Polyketide synthase PksJ.	0.437
era_3	rpsQ	ACWI_29700	ACWI_05740	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.437
era_3	ybeY	ACWI_29700	ACWI_29720	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.993
pksJ	dgkA	ACWI_26840	ACWI_29710	Polyketide synthase PksJ.	Undecaprenol kinase.	0.468
pksJ	era_3	ACWI_26840	ACWI_29700	Polyketide synthase PksJ.	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.437
pksJ	rplK	ACWI_26840	ACWI_32220	Polyketide synthase PksJ.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.954
pksJ	rplM	ACWI_26840	ACWI_05990	Polyketide synthase PksJ.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.975
pksJ	rplO	ACWI_26840	ACWI_05830	Polyketide synthase PksJ.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.959
pksJ	rplQ	ACWI_26840	ACWI_05940	Polyketide synthase PksJ.	50S ribosomal protein L17.	0.969
pksJ	rplU	ACWI_26840	ACWI_21540	Polyketide synthase PksJ.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.976
pksJ	rplX	ACWI_26840	ACWI_05760	Polyketide synthase PksJ.	50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.954
pksJ	rpsQ	ACWI_26840	ACWI_05740	Polyketide synthase PksJ.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.936
pksJ	ybeY	ACWI_26840	ACWI_29720	Polyketide synthase PksJ.	Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.921
rplK	pksJ	ACWI_32220	ACWI_26840	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Polyketide synthase PksJ.	0.954
rplK	rplM	ACWI_32220	ACWI_05990	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.995
rplK	rplO	ACWI_32220	ACWI_05830	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.996

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