Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
acoR_2Acetoin dehydrogenase operon transcriptional activator AcoR. (664 aa)    
Predicted Functional Partners:
rpoN1
RNA polymerase sigma-54 factor 1.
 
   
 0.807
pucA_2
Putative xanthine dehydrogenase subunit A.
       0.773
cobC
Alpha-ribazole phosphatase.
       0.737
lsrF
Putative aldolase LsrF.
    
   0.580
sfrB_3
NADPH-Fe(3+) oxidoreductase subunit beta.
     
 0.573
bioC
Malonyl-[acyl-carrier protein] O-methyltransferase.
     
 0.552
mocA_2
Molybdenum cofactor cytidylyltransferase.
       0.547
pucA_3
Putative xanthine dehydrogenase subunit A.
       0.547
ACWI_30640
Phenylacetate-coenzyme A ligase.
       0.547
moaA_4
Cyclic pyranopterin monophosphate synthase.
       0.547
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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