STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bioCMalonyl-[acyl-carrier protein] O-methyltransferase. (238 aa)    
Predicted Functional Partners:
ACWI_30680
Hypothetical protein.
 
     0.950
sfrB_3
NADPH-Fe(3+) oxidoreductase subunit beta.
 
  
 0.950
ACWI_30660
Putative redox-active protein; C_GCAxxG_C_C.
 
     0.949
moaA_4
Cyclic pyranopterin monophosphate synthase.
 
     0.946
ACWI_30640
Phenylacetate-coenzyme A ligase.
 
  
 0.937
mocA_2
Molybdenum cofactor cytidylyltransferase.
 
     0.923
mop
Aldehyde oxidoreductase.
 
    0.872
pucA_3
Putative xanthine dehydrogenase subunit A.
 
    0.835
cobC
Alpha-ribazole phosphatase.
 
     0.676
rsmA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
      
 0.641
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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