STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sfrB_3NADPH-Fe(3+) oxidoreductase subunit beta. (782 aa)    
Predicted Functional Partners:
gltB_1
Ferredoxin-dependent glutamate synthase 1.
 
 
 0.999
hndC_1
NADP-reducing hydrogenase subunit HndC.
  
 
 0.970
hndC_2
NADP-reducing hydrogenase subunit HndC.
  
 
 0.970
moaA_4
Cyclic pyranopterin monophosphate synthase.
 
     0.963
ACWI_30680
Hypothetical protein.
 
     0.963
ACWI_30660
Putative redox-active protein; C_GCAxxG_C_C.
 
     0.952
mocA_2
Molybdenum cofactor cytidylyltransferase.
 
    0.950
ACWI_30640
Phenylacetate-coenzyme A ligase.
 
   
 0.950
bioC
Malonyl-[acyl-carrier protein] O-methyltransferase.
 
  
 0.950
mop
Aldehyde oxidoreductase.
 
   
 0.939
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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