STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_30720Clostridial hydrophobic W. (694 aa)    
Predicted Functional Partners:
ACWI_09550
VTC domain protein.
 
     0.785
ACWI_08900
VTC domain protein.
 
     0.784
ACWI_09540
Hypothetical protein.
 
     0.779
ACWI_08910
Hypothetical protein.
 
     0.778
cpdB
2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor; Belongs to the 5'-nucleotidase family.
   
 
 0.599
ACWI_15330
Hypothetical protein.
 
     0.596
ACWI_00690
Hypothetical protein.
   
   0.576
ACWI_03970
Ion channel.
   
 
 0.521
ACWI_08530
Pentapeptide repeats (8 copies).
   
 
 0.521
ACWI_13860
Pentapeptide repeats (8 copies).
   
 
 0.521
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.