STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_30740Hypothetical protein. (345 aa)    
Predicted Functional Partners:
rpoE
ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.856
ylaC
RNA polymerase sigma factor YlaC; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.856
sigW
ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.856
sigK_1
ECF RNA polymerase sigma factor SigK; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.856
sigK_2
RNA polymerase sigma-28 factor precursor; Belongs to the sigma-70 factor family.
  
 
 0.853
sigH
RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family.
  
 
 0.852
ACWI_27520
RNA polymerase sigma factor.
  
 
 0.852
ACWI_03500
Hypothetical protein.
  
 
 0.826
ACWI_33120
Hypothetical protein.
  
 
 0.826
ACWI_30730
Hypothetical protein.
       0.757
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.