Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACWI_30760NADPH-dependent FMN reductase. (183 aa)    
Predicted Functional Partners:
ACWI_30750
Hypothetical protein.
     
 0.800
azoR
FMN-dependent NADH-azoreductase.
  
     0.612
ACWI_28510
Iron-sulfur flavoprotein.
  
     0.612
ywqN
Putative NAD(P)H-dependent FMN-containing oxidoreductase YwqN.
  
     0.607
ACWI_30740
Hypothetical protein.
       0.548
ACWI_30730
Hypothetical protein.
       0.537
ACWI_30770
tetR family regulatory protein.
       0.456
rbn_1
Ribonuclease BN.
 
     0.414
yddE
Putative isomerase YddE.
 
     0.402
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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