STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
queG_6Epoxyqueuosine reductase. (266 aa)    
Predicted Functional Partners:
nifJ
Pyruvate-flavodoxin oxidoreductase.
    
 0.780
ACWI_31110
Hypothetical protein.
       0.727
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.629
ACWI_31130
Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.569
korA
2-oxoglutarate oxidoreductase subunit KorA.
    
 0.565
ACWI_32040
Hypothetical protein.
  
     0.442
pgiB
Glucose-6-phosphate isomerase B; Belongs to the GPI family.
    
 0.420
gltA
Citrate synthase; Belongs to the citrate synthase family.
     
 0.410
pta
Phosphate acetyltransferase.
    
  0.401
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.