Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACWI_31940FmdE, molybdenum formylmethanofuran dehydrogenase operon. (174 aa)    
Predicted Functional Partners:
cooS1_2
Carbon monoxide dehydrogenase 1.
  
  
 0.937
cooS1_1
Carbon monoxide dehydrogenase 1.
  
  
 0.916
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
   
 
 0.906
cinA_2
Putative competence-damage inducible protein.
  
 
  0.902
ACWI_17860
FmdE, molybdenum formylmethanofuran dehydrogenase operon.
  
  
 
0.901
fdhF
Formate dehydrogenase H.
     
  0.900
padI
NADH-dependent phenylglyoxylate dehydrogenase subunit beta.
     
  0.900
ACWI_31950
Iron-dicitrate transporter substrate-binding subunit.
 
     0.890
fhuC
Iron(3+)-hydroxamate import ATP-binding protein FhuC.
 
    0.843
hmuU_2
Hemin transport system permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.756
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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