STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
minD_2Septum site-determining protein MinD. (262 aa)    
Predicted Functional Partners:
ACWI_32100
Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha.
 
  
 0.949
ACWI_29210
Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha.
 
  
 0.941
acsD
Corrinoid/iron-sulfur protein small subunit.
 
  
 0.925
acsC
Corrinoid/iron-sulfur protein large subunit.
 
  
 0.920
ascD
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase.
 
   
 0.901
ACWI_32030
Hypothetical protein.
 
     0.899
ACWI_32040
Hypothetical protein.
 
     0.897
cooS1_2
Carbon monoxide dehydrogenase 1.
 
   
 0.837
acsE_7
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
   
 0.825
ACWI_32120
Putative RNA-binding protein.
 
    0.809
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.