STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
minD_3Septum site-determining protein MinD. (261 aa)    
Predicted Functional Partners:
ACWI_32100
Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha.
 
  
 0.977
acsD
Corrinoid/iron-sulfur protein small subunit.
 
  
 0.960
cooS1_2
Carbon monoxide dehydrogenase 1.
 
   
 0.956
acsC
Corrinoid/iron-sulfur protein large subunit.
 
  
 0.952
ACWI_29210
Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha.
 
  
 0.948
acsE_7
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
   
 0.856
ACWI_32120
Putative RNA-binding protein.
 
    0.824
ACWI_32030
Hypothetical protein.
 
     0.812
ACWI_32040
Hypothetical protein.
 
     0.812
ACWI_34500
Hypothetical protein; Methylene-tetrahydrofolate reductase C terminal.
 
   
 0.799
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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