Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ntrCNitrogen assimilation regulatory protein. (484 aa)    
Predicted Functional Partners:
fliN
Flagellar motor switch protein FliN.
  
  
 0.839
rpoN1
RNA polymerase sigma-54 factor 1.
 
   
 0.806
minD_1
Septum site-determining protein MinD.
  
 
 0.797
barA_2
Signal transduction histidine-protein kinase BarA.
  
 
 0.772
barA_1
Signal transduction histidine-protein kinase BarA.
  
 
 0.768
ACWI_35610
Iron hydrogenase 1.
 
    
 0.730
ydaM_4
Putative diguanylate cyclase YdaM.
  
 
 0.709
fliM
Flagellar motor switch protein FliM.
  
  
 0.677
fliP
Flagellar biosynthetic protein FliP precursor; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.664
cheA_3
Chemotaxis protein CheA.
  
 
 0.644
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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