Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_33630Kelch motif protein. (442 aa)    
Predicted Functional Partners:
ACWI_33640
Collagen triple helix repeat (20 copies).
 
     0.897
ACWI_33650
Hypothetical protein.
       0.727
ACWI_33660
Prophage endopeptidase tail.
       0.712
ACWI_33680
Tropomyosin like protein.
       0.703
ACWI_33670
Hypothetical protein.
       0.688
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
     0.641
nhoA
N-hydroxyarylamine O-acetyltransferase; Belongs to the arylamine N-acetyltransferase family.
 
     0.595
ACWI_33620
Holin family protein.
       0.584
ACWI_25450
GH3 auxin-responsive promoter.
  
     0.564
hhoB
Putative serine protease HhoB precursor.
  
     0.547
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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