Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
stp_3Multidrug resistance protein Stp. (398 aa)    
Predicted Functional Partners:
bmr3_1
Multidrug resistance protein 3.
  
     0.601
ACWI_34730
Multidrug resistance protein D.
 
    
0.599
stp_1
Multidrug resistance protein Stp; Belongs to the major facilitator superfamily.
  
     0.596
pksJ
Polyketide synthase PksJ.
     
 0.508
lgrD
Linear gramicidin synthase subunit D; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.495
bmr3_2
Multidrug resistance protein 3.
  
     0.453
ACWI_01570
Macrolide transporter subunit MacA.
  
 
 0.445
exuT_2
Hexuronate transporter.
  
   
 0.419
naiP
Putative niacin/nicotinamide transporter NaiP.
  
   
 0.409
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.