STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_35190B12 binding domain protein. (442 aa)    
Predicted Functional Partners:
mtaB_2
Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB.
 
  
  0.984
ACWI_14900
B12 binding domain protein.
  
  
  0.927
ACWI_14930
Coproporphyrinogen III oxidase.
  
  
  0.927
prmB
50S ribosomal protein L3 glutamine methyltransferase.
 
 
 0.918
ACWI_02830
Hypothetical protein.
 
     0.779
rimO_1
Ribosomal protein S12 methylthiotransferase RimO.
  
     0.760
vnfA_2
Nitrogen fixation protein VnfA.
  
 
 0.723
ACWI_14940
Radical SAM superfamily protein.
  
     0.721
ACWI_21840
V4R domain protein.
  
 
 0.707
cobT_2
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
       0.695
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.