Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACWI_35310 | atpD_2 | ACWI_35310 | ACWI_23430 | Peptidase M16C associated. | ATP synthase subunit beta, sodium ion specific; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.791 |
| ACWI_35310 | atpE_2 | ACWI_35310 | ACWI_23480 | Peptidase M16C associated. | ATP synthase subunit c, sodium ion specific; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.570 |
| ACWI_35310 | atpH_1 | ACWI_35310 | ACWI_03850 | Peptidase M16C associated. | ATP synthase subunit c; Belongs to the V-ATPase proteolipid subunit family. | 0.570 |
| ACWI_35310 | dacB | ACWI_35310 | ACWI_35300 | Peptidase M16C associated. | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | 0.741 |
| ACWI_35310 | groL | ACWI_35310 | ACWI_28060 | Peptidase M16C associated. | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.759 |
| ACWI_35310 | lpd_4 | ACWI_35310 | ACWI_24190 | Peptidase M16C associated. | Dihydrolipoyl dehydrogenase. | 0.818 |
| ACWI_35310 | paeR7IM | ACWI_35310 | ACWI_35330 | Peptidase M16C associated. | Modification methylase PaeR7I. | 0.578 |
| ACWI_35310 | pepP | ACWI_35310 | ACWI_07210 | Peptidase M16C associated. | Xaa-Pro aminopeptidase. | 0.626 |
| ACWI_35310 | prs_1 | ACWI_35310 | ACWI_01450 | Peptidase M16C associated. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.605 |
| ACWI_35310 | rarA | ACWI_35310 | ACWI_35320 | Peptidase M16C associated. | Replication-associated recombination protein A. | 0.709 |
| atpD_2 | ACWI_35310 | ACWI_23430 | ACWI_35310 | ATP synthase subunit beta, sodium ion specific; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | Peptidase M16C associated. | 0.791 |
| atpD_2 | atpE_2 | ACWI_23430 | ACWI_23480 | ATP synthase subunit beta, sodium ion specific; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP synthase subunit c, sodium ion specific; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.996 |
| atpD_2 | atpH_1 | ACWI_23430 | ACWI_03850 | ATP synthase subunit beta, sodium ion specific; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP synthase subunit c; Belongs to the V-ATPase proteolipid subunit family. | 0.983 |
| atpD_2 | groL | ACWI_23430 | ACWI_28060 | ATP synthase subunit beta, sodium ion specific; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.788 |
| atpD_2 | lpd_4 | ACWI_23430 | ACWI_24190 | ATP synthase subunit beta, sodium ion specific; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | Dihydrolipoyl dehydrogenase. | 0.656 |
| atpD_2 | prs_1 | ACWI_23430 | ACWI_01450 | ATP synthase subunit beta, sodium ion specific; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.702 |
| atpE_2 | ACWI_35310 | ACWI_23480 | ACWI_35310 | ATP synthase subunit c, sodium ion specific; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Peptidase M16C associated. | 0.570 |
| atpE_2 | atpD_2 | ACWI_23480 | ACWI_23430 | ATP synthase subunit c, sodium ion specific; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | ATP synthase subunit beta, sodium ion specific; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.996 |
| atpH_1 | ACWI_35310 | ACWI_03850 | ACWI_35310 | ATP synthase subunit c; Belongs to the V-ATPase proteolipid subunit family. | Peptidase M16C associated. | 0.570 |
| atpH_1 | atpD_2 | ACWI_03850 | ACWI_23430 | ATP synthase subunit c; Belongs to the V-ATPase proteolipid subunit family. | ATP synthase subunit beta, sodium ion specific; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.983 |
page 1 of 3