STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_35720Hypothetical protein. (100 aa)    
Predicted Functional Partners:
ACWI_35730
Hypothetical protein.
 
     0.951
nhaP_2
Na(+)/H(+) antiporter NhaP.
       0.746
smc_2
Chromosome partition protein Smc.
  
 
 0.731
cgkA
Kappa-carrageenase precursor.
  
 
 0.714
ACWI_06040
Hypothetical protein.
  
 
 0.714
mepM_5
Murein DD-endopeptidase MepM.
  
 
 0.703
pksJ
Polyketide synthase PksJ.
  
  
 0.676
ACWI_14650
Outer membrane-specific lipoprotein transporter subunit LolE.
  
 
 0.662
smc_1
Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.657
ACWI_07090
Hypothetical protein; RecF/RecN/SMC N terminal domain.
  
 
 0.657
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.