STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_35720Hypothetical protein. (100 aa)    
Predicted Functional Partners:
ACWI_35730
Hypothetical protein.
 
     0.952
nhaP_2
Na(+)/H(+) antiporter NhaP.
       0.746
trxA_1
Thioredoxin-1; Belongs to the thioredoxin family.
    
 
 0.699
trxA_2
Thioredoxin-1; Belongs to the thioredoxin family.
    
 
 0.699
trxA_3
Thioredoxin-1; Belongs to the thioredoxin family.
    
 
 0.699
pksJ
Polyketide synthase PksJ.
  
  
 0.670
ACWI_08350
TIM-barrel signal transduction protein.
   
    0.608
ACWI_08340
Hypothetical protein.
   
    0.606
smc_2
Chromosome partition protein Smc.
  
 
 0.553
ywaC
GTP pyrophosphokinase YwaC.
  
    0.551
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.