Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yfeOPutative ion-transport protein YfeO. (410 aa)    
Predicted Functional Partners:
alsT_1
Amino-acid carrier protein AlsT.
   
    0.527
alsT_2
Amino-acid carrier protein AlsT.
   
    0.527
alsT_3
Amino-acid carrier protein AlsT.
   
    0.527
pksJ
Polyketide synthase PksJ.
     
 0.497
cdr_4
Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family.
  
  
 0.493
gmr_8
Cyclic di-GMP phosphodiesterase Gmr.
       0.486
fucA
L-fuculose phosphate aldolase.
       0.486
fruA
PTS system fructose-specific EIIABC component.
     
 0.480
nnr
Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to al [...]
     
 0.474
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.462
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.