Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEL49825.1 | EEL49970.1 | bcere0022_29100 | bcere0022_27450 | Similar to 2-oxoglutarate ferredoxin oxidoreductase subunit alpha PRK08659; similar to Pyruvate ferredoxin oxidoreductase alpha chain of Bacillales UniRef RepID=Q2YXM8_STAAB. | Hypothetical protein; Similar to motif COG2962. | 0.533 |
EEL49969.1 | EEL49970.1 | bcere0022_27440 | bcere0022_27450 | Integral membrane protein; Similar to Uncharacterized protein conserved in bacteria COG1963; similar to Integral membrane protein of Firmicutes UniRef RepID=Q3ERU7_BACTI. | Hypothetical protein; Similar to motif COG2962. | 0.447 |
EEL49970.1 | EEL49825.1 | bcere0022_27450 | bcere0022_29100 | Hypothetical protein; Similar to motif COG2962. | Similar to 2-oxoglutarate ferredoxin oxidoreductase subunit alpha PRK08659; similar to Pyruvate ferredoxin oxidoreductase alpha chain of Bacillales UniRef RepID=Q2YXM8_STAAB. | 0.533 |
EEL49970.1 | EEL49969.1 | bcere0022_27450 | bcere0022_27440 | Hypothetical protein; Similar to motif COG2962. | Integral membrane protein; Similar to Uncharacterized protein conserved in bacteria COG1963; similar to Integral membrane protein of Firmicutes UniRef RepID=Q3ERU7_BACTI. | 0.447 |
EEL49970.1 | EEL49971.1 | bcere0022_27450 | bcere0022_27460 | Hypothetical protein; Similar to motif COG2962. | Similar to Predicted membrane protein COG3326; similar to Membrane protein, putative of Bacillus cereus group UniRef RepID=Q4MKR5_BACCE. | 0.613 |
EEL49971.1 | EEL49970.1 | bcere0022_27460 | bcere0022_27450 | Similar to Predicted membrane protein COG3326; similar to Membrane protein, putative of Bacillus cereus group UniRef RepID=Q4MKR5_BACCE. | Hypothetical protein; Similar to motif COG2962. | 0.613 |