STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEL49983.1Similar to membrane-bound transcriptional regulator LytR PRK09379; similar to Transcriptional regulator, LytR family of Bacillus cereus group UniRef RepID=Q81HK5_BACCR. (360 aa)    
Predicted Functional Partners:
EEL49985.1
RNA polymerase sigma-70 factor, ECF subfamily; Similar to DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog COG1595; similar to RNA polymerase sigma-70 factor, ECF subfamily of Bacillus cereus group UniRef RepID=B0AS51_BACAN.
  
    0.725
EEL49984.1
Similar to ECF-type sigma factor negative effector of Bacillus cereus group UniRef RepID=Q81AI0_BACCR.
       0.718
sepF
Cell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
 
     0.533
EEL48497.1
Teichoic acid linkage unit synthesis; Similar to UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase COG0472; similar to Teichoic acid linkage unit synthesis (Undecaprenylpyrophosphate-N-aetylglucosamine) of Bacillales UniRef RepID=Q5KV32_GEOKA.
 
  
 0.506
recF-2
DNA replication and repair protein recF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.
  
     0.480
EEL52471.1
YbbR; Similar to Uncharacterized protein conserved in bacteria COG4856; similar to YbbR family protein of Bacillus cereus group UniRef RepID=A9VPC2_BACWK.
 
     0.410
recO
DNA repair protein recO; Involved in DNA repair and RecF pathway recombination.
 
     0.405
EEL48522.1
Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
     0.403
Your Current Organism:
Bacillus cereus Rock344
NCBI taxonomy Id: 526986
Other names: B. cereus Rock3-44, Bacillus cereus Rock3-44
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