Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEL49229.1 | rplM | bcere0022_34670 | bcere0022_1430 | Similar to 30S ribosomal protein S20 PRK00239; similar to 30S ribosomal protein S20 of Bacilli UniRef RepID=RS20_BACAN. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.982 |
| EEL49229.1 | rplS | bcere0022_34670 | bcere0022_29800 | Similar to 30S ribosomal protein S20 PRK00239; similar to 30S ribosomal protein S20 of Bacilli UniRef RepID=RS20_BACAN. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.973 |
| EEL49229.1 | rplU | bcere0022_34670 | bcere0022_35810 | Similar to 30S ribosomal protein S20 PRK00239; similar to 30S ribosomal protein S20 of Bacilli UniRef RepID=RS20_BACAN. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.982 |
| EEL49229.1 | rpmA | bcere0022_34670 | bcere0022_35790 | Similar to 30S ribosomal protein S20 PRK00239; similar to 30S ribosomal protein S20 of Bacilli UniRef RepID=RS20_BACAN. | Similar to 50S ribosomal protein L27 PRK05435; similar to 50S ribosomal protein L27 of cellular organisms UniRef RepID=RL27_CLOK5; Belongs to the bacterial ribosomal protein bL27 family. | 0.981 |
| EEL49229.1 | rpmB | bcere0022_34670 | bcere0022_29980 | Similar to 30S ribosomal protein S20 PRK00239; similar to 30S ribosomal protein S20 of Bacilli UniRef RepID=RS20_BACAN. | Similar to 50S ribosomal protein L28 PRK00359; similar to 50S ribosomal protein L28 of Bacteria UniRef RepID=RL28_STRA1; Belongs to the bacterial ribosomal protein bL28 family. | 0.982 |
| EEL49229.1 | rpmI | bcere0022_34670 | bcere0022_37030 | Similar to 30S ribosomal protein S20 PRK00239; similar to 30S ribosomal protein S20 of Bacilli UniRef RepID=RS20_BACAN. | Similar to 50S ribosomal protein L35 PRK00172; similar to 50S ribosomal protein L35 of Bacteria UniRef RepID=RL35_LISIN; Belongs to the bacterial ribosomal protein bL35 family. | 0.946 |
| EEL49229.1 | rpsF | bcere0022_34670 | bcere0022_45140 | Similar to 30S ribosomal protein S20 PRK00239; similar to 30S ribosomal protein S20 of Bacilli UniRef RepID=RS20_BACAN. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.965 |
| EEL49229.1 | rpsO | bcere0022_34670 | bcere0022_29470 | Similar to 30S ribosomal protein S20 PRK00239; similar to 30S ribosomal protein S20 of Bacilli UniRef RepID=RS20_BACAN. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.982 |
| EEL49229.1 | rpsP | bcere0022_34670 | bcere0022_29840 | Similar to 30S ribosomal protein S20 PRK00239; similar to 30S ribosomal protein S20 of Bacilli UniRef RepID=RS20_BACAN. | Similar to 30S ribosomal protein S16 PRK00040; similar to 30S ribosomal protein S16 of root UniRef RepID=RS16_LEUMM; Belongs to the bacterial ribosomal protein bS16 family. | 0.982 |
| EEL49229.1 | rpsU | bcere0022_34670 | bcere0022_34530 | Similar to 30S ribosomal protein S20 PRK00239; similar to 30S ribosomal protein S20 of Bacilli UniRef RepID=RS20_BACAN. | Similar to 30S ribosomal protein S21 PRK00270; similar to 30S ribosomal protein S21 of Bacteria UniRef RepID=RS21_LISIN; Belongs to the bacterial ribosomal protein bS21 family. | 0.982 |
| rplM | EEL49229.1 | bcere0022_1430 | bcere0022_34670 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Similar to 30S ribosomal protein S20 PRK00239; similar to 30S ribosomal protein S20 of Bacilli UniRef RepID=RS20_BACAN. | 0.982 |
| rplM | rplS | bcere0022_1430 | bcere0022_29800 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.986 |
| rplM | rplU | bcere0022_1430 | bcere0022_35810 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.983 |
| rplM | rpmA | bcere0022_1430 | bcere0022_35790 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Similar to 50S ribosomal protein L27 PRK05435; similar to 50S ribosomal protein L27 of cellular organisms UniRef RepID=RL27_CLOK5; Belongs to the bacterial ribosomal protein bL27 family. | 0.990 |
| rplM | rpmB | bcere0022_1430 | bcere0022_29980 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Similar to 50S ribosomal protein L28 PRK00359; similar to 50S ribosomal protein L28 of Bacteria UniRef RepID=RL28_STRA1; Belongs to the bacterial ribosomal protein bL28 family. | 0.982 |
| rplM | rpmI | bcere0022_1430 | bcere0022_37030 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Similar to 50S ribosomal protein L35 PRK00172; similar to 50S ribosomal protein L35 of Bacteria UniRef RepID=RL35_LISIN; Belongs to the bacterial ribosomal protein bL35 family. | 0.983 |
| rplM | rpsF | bcere0022_1430 | bcere0022_45140 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.981 |
| rplM | rpsO | bcere0022_1430 | bcere0022_29470 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.990 |
| rplM | rpsP | bcere0022_1430 | bcere0022_29840 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Similar to 30S ribosomal protein S16 PRK00040; similar to 30S ribosomal protein S16 of root UniRef RepID=RS16_LEUMM; Belongs to the bacterial ribosomal protein bS16 family. | 0.986 |
| rplM | rpsU | bcere0022_1430 | bcere0022_34530 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Similar to 30S ribosomal protein S21 PRK00270; similar to 30S ribosomal protein S21 of Bacteria UniRef RepID=RS21_LISIN; Belongs to the bacterial ribosomal protein bS21 family. | 0.979 |
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