STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAV93284.1Hypothetical protein. (597 aa)    
Predicted Functional Partners:
GAV93450.1
Oxoglutarate dehydrogenase(succinyl-transferring), E1 component.
    
 
 0.999
GAV93451.1
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.999
GAV94056.1
Hypothetical protein.
   
 
 0.999
GAV93285.1
Hypothetical protein.
 
 
   0.901
GAV93291.1
Hypothetical protein.
  
     0.759
GAV94599.1
Hypothetical protein.
  
     0.747
GAV93292.1
Hypothetical protein.
  
     0.742
GAV93289.1
Transglutaminase-like protein.
  
     0.732
GAV94882.1
Hypothetical protein.
  
     0.705
GAV93290.1
Hypothetical protein.
  
     0.692
Your Current Organism:
Actinomyces denticolens
NCBI taxonomy Id: 52767
Other names: A. denticolens, ATCC 43322, CCUG 32758, CIP 103126, DSM 20671, NCTC 11490, strain Sh 8/4303
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.