STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO45499.1Na+/H+ antiporter subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology. (492 aa)    
Predicted Functional Partners:
APO48276.1
Na+/H+ antiporter subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.999
APO45497.1
Subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
APO45498.1
Na+/H+ antiporter subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
APO45500.1
Na(+)/H(+) antiporter subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
APO45496.1
Na+/H+ antiporter subunit G; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
APO48122.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.732
APO43416.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.575
APO46061.1
Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family.
 
   
 0.412
Your Current Organism:
Paenibacillus xylanexedens
NCBI taxonomy Id: 528191
Other names: DSM 21292, NRRL B-51090, P. xylanexedens, Paenibacillus sp. B22a, Paenibacillus xylanexedens Nelson et al. 2009, strain B22a
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