Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APO46040.1Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)    
Predicted Functional Partners:
APO43428.1
Type 1 glutamine amidotransferase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.824
APO44965.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.512
APO44079.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
    
  0.458
APO44408.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.458
APO45075.1
Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
    
  0.458
APO45136.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.458
APO45404.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.458
APO45744.1
Beta-glucuronidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.458
APO47637.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.458
APO47745.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
    
  0.458
Your Current Organism:
Paenibacillus xylanexedens
NCBI taxonomy Id: 528191
Other names: DSM 21292, NRRL B-51090, P. xylanexedens, Paenibacillus sp. B22a, Paenibacillus xylanexedens Nelson et al. 2009, strain B22a
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.