STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALG70015.1Magnesium transporter MgtC; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)    
Predicted Functional Partners:
ALG71017.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.815
ALG74408.1
Metal ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.694
ALG75295.1
Formamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.663
ALG75365.1
Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.654
ALG70014.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.606
ALG73557.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.487
ALG71247.1
Flagellar biosynthesis protein FliR; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.441
ALG74946.1
Flagellar biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.441
ALG75366.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.440
ALG73551.1
4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.422
Your Current Organism:
Azospirillum thiophilum
NCBI taxonomy Id: 528244
Other names: A. thiophilum, Azospirillum sp. BV-s, Azospirillum thiophilum Lavrinenko et al. 2010, DSM 21654, VKM B-2513, strain BV-S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.