Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALG73282.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (580 aa)    
Predicted Functional Partners:
ALG73791.1
Flagellin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.787
ALG72205.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.757
ALG69696.1
Flagellin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.741
ALG71702.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.709
ALG74405.1
Ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.679
ALG72154.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.672
ALG74317.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
ALG73552.1
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.653
ALG73051.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.651
ALG70239.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.649
Your Current Organism:
Azospirillum thiophilum
NCBI taxonomy Id: 528244
Other names: A. thiophilum, Azospirillum sp. BV-s, Azospirillum thiophilum Lavrinenko et al. 2010, DSM 21654, VKM B-2513, strain BV-S
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