Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ALG74026.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)    
Predicted Functional Partners:
ALG74028.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.970
ALG74027.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.931
ALG74029.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.843
ALG70825.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.837
ALG70826.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.782
ALG72404.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.654
ALG74295.1
cob(II)yrinic acid a,c-diamide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.654
ALG74473.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.590
ALG71662.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.531
ALG74030.1
Thymidine phosphorylase; Catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.529
Your Current Organism:
Azospirillum thiophilum
NCBI taxonomy Id: 528244
Other names: A. thiophilum, Azospirillum sp. BV-s, Azospirillum thiophilum Lavrinenko et al. 2010, DSM 21654, VKM B-2513, strain BV-S
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