STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nadAQuinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (363 aa)    
Predicted Functional Partners:
ALG74425.1
Nicotinate-nucleotide pyrophosphorylase; Catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.
 
 
 0.997
ALG72852.1
3-ketosteroid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.981
ALG70132.1
Pyrophosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.
 
  
 0.970
ALG74996.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.945
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
  
 0.832
ALG71893.1
Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.730
ALG70991.1
Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.730
ALG73786.1
Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.730
ALG74015.1
Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.730
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
      0.676
Your Current Organism:
Azospirillum thiophilum
NCBI taxonomy Id: 528244
Other names: A. thiophilum, Azospirillum sp. BV-s, Azospirillum thiophilum Lavrinenko et al. 2010, DSM 21654, VKM B-2513, strain BV-S
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