STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8IC07Homeobox domain-containing protein. (435 aa)    
Predicted Functional Partners:
A0A4S8J883
HALZ domain-containing protein.
    
 
 0.557
A0A4S8JCI0
Uncharacterized protein.
    
 0.552
A0A4S8JH66
Uncharacterized protein.
    
 0.552
A0A4S8JVU6
Uncharacterized protein.
  
 
   0.538
A0A4S8IA17
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.446
A0A4S8IDE5
Hist_deacetyl domain-containing protein.
    
  0.446
A0A4S8IQ18
Uncharacterized protein.
    
  0.446
A0A4S8JA70
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.446
A0A4S8JMY0
Uncharacterized protein.
    
  0.446
A0A4S8JVE3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.446
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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