STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8IGY8Uncharacterized protein. (388 aa)    
Predicted Functional Partners:
A0A4S8IFW5
Uncharacterized protein.
  
0.770
A0A4S8IPM8
ATG_C domain-containing protein.
    
 
 0.688
A0A4S8IZ21
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
    
 
 0.688
A0A4V4H3R8
ATG_C domain-containing protein.
    
 
 0.688
A0A4S8I953
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
    
 
 0.536
A0A4S8IQC4
Uncharacterized protein.
      
 0.534
A0A4S8JSS6
Protein kinase domain-containing protein.
      
 0.467
A0A4S8J1Q3
Autophagy-related protein 3.
   
  
 0.464
A0A4S8JE99
Autophagy protein 5; Required for autophagy.
      
 0.450
A0A4S8JHW1
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
      
 0.445
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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