STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8ILM7RNA polymerase II C-terminal domain phosphatase-like; This promotes the activity of RNA polymerase II. (258 aa)    
Predicted Functional Partners:
A0A4S8J3C8
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.950
A0A4S8K4C8
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.950
A0A4S8J0N9
Uncharacterized protein.
    
 0.947
A0A4S8JBU8
RPOLD domain-containing protein.
    
 0.942
A0A4S8JRM1
RPOLD domain-containing protein.
    
 0.942
A0A4S8J9T9
DUF4101 domain-containing protein.
    
 0.918
A0A4S8KBR5
SHS2_Rpb7-N domain-containing protein.
    
 0.918
A0A4S8KEL0
Uncharacterized protein.
    
 0.918
A0A4S8IMI1
RNA_pol_L_2 domain-containing protein.
    
 0.886
A0A4S8IWP9
RNA_pol_L_2 domain-containing protein.
    
 0.886
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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