A0A4S8ISU1 protein (Musa balbisiana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4S8ISU1

Uncharacterized protein. (593 aa)

Predicted Functional Partners:

A0A4S8IAK8

0.842

A0A4S8JVW9

0.839

A0A4S8KCX6

0.831

A0A4S8IJ98

0.825

A0A4S8ILH3

0.816

A0A4S8JFP5

0.799

A0A4S8IK53

0.790

A0A4S8IKX7

0.790

A0A4S8JNB4

0.790

A0A4S8JSA1

0.790

Your Current Organism:

Musa balbisiana

NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4S8IAK8	A0A4S8ILH3	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A4S8IAK8	A0A4S8ISU1	Uncharacterized protein.	Uncharacterized protein.	0.842
A0A4S8IAK8	A0A4S8JFP5	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.986
A0A4S8IAK8	A0A4S8JVW9	Uncharacterized protein.	Uncharacterized protein.	0.993
A0A4S8IAK8	A0A4S8KCX6	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A4S8IJ98	A0A4S8IK53	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A4S8IJ98	A0A4S8IKX7	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A4S8IJ98	A0A4S8ISU1	Uncharacterized protein.	Uncharacterized protein.	0.825
A0A4S8IJ98	A0A4S8JNB4	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.999
A0A4S8IJ98	A0A4S8JSA1	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.999
A0A4S8IK53	A0A4S8IJ98	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A4S8IK53	A0A4S8ISU1	Uncharacterized protein.	Uncharacterized protein.	0.790
A0A4S8IKX7	A0A4S8IJ98	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A4S8IKX7	A0A4S8ISU1	Uncharacterized protein.	Uncharacterized protein.	0.790
A0A4S8ILH3	A0A4S8IAK8	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A4S8ILH3	A0A4S8ISU1	Uncharacterized protein.	Uncharacterized protein.	0.816
A0A4S8ILH3	A0A4S8JFP5	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.860
A0A4S8ILH3	A0A4S8JVW9	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A4S8ILH3	A0A4S8KCX6	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A4S8ISU1	A0A4S8IAK8	Uncharacterized protein.	Uncharacterized protein.	0.842