STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8J1W3Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (364 aa)    
Predicted Functional Partners:
A0A4S8JRA0
Uncharacterized protein.
     
 0.758
A0A4S8IQY2
ATG13 domain-containing protein.
   
 0.661
A0A4S8JW70
ATG13 domain-containing protein.
   
 0.661
A0A4S8KGV7
ATG13 domain-containing protein.
   
 0.661
A0A4S8IG94
Amidase domain-containing protein.
    
  0.500
A0A4S8IHI6
TPR_REGION domain-containing protein.
    
  0.500
A0A4S8JPG6
TPR_REGION domain-containing protein.
    
  0.500
A0A4S8JX22
NmrA domain-containing protein.
     
 0.432
A0A4S8IYY1
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.415
A0A4S8KE62
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.415
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.