STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8J3V3RING-type domain-containing protein. (269 aa)    
Predicted Functional Partners:
A0A4S8KFT4
Uncharacterized protein.
    
  0.830
A0A4S8KFY1
Uncharacterized protein.
    
  0.740
A0A4S8IL35
Small ubiquitin-related modifier.
    
 0.702
A0A4S8JZ66
Small ubiquitin-related modifier.
    
 0.702
A0A4S8K0E0
Small ubiquitin-related modifier.
    
 0.702
A0A4S8K264
Small ubiquitin-related modifier.
    
 0.702
A0A4V6T4Q5
Uncharacterized protein.
    
 0.702
A0A4S8I9T0
HDAC_interact domain-containing protein.
    
 0.586
A0A4S8ID24
HDAC_interact domain-containing protein.
    
 0.586
A0A4S8J4X3
HDAC_interact domain-containing protein.
    
 0.586
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
Server load: low (24%) [HD]