STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8J4J0RRM domain-containing protein. (136 aa)    
Predicted Functional Partners:
A0A4S8KCV7
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.953
A0A4S8JMJ8
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.951
CYN
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.947
A0A4S8I8Y7
X8 domain-containing protein.
   
 0.871
A0A4S8I9F1
DUF3700 domain-containing protein.
   
 0.871
A0A4S8I9N6
DUF3700 domain-containing protein.
   
 0.871
A0A4S8IZP0
DUF3700 domain-containing protein.
   
 0.871
A0A4S8J3N2
X8 domain-containing protein.
   
 0.871
A0A4S8J9U5
DUF3700 domain-containing protein.
   
 0.871
A0A4S8JEI9
DUF3700 domain-containing protein.
   
 0.871
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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