STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8J519Uncharacterized protein; Belongs to the DEAD box helicase family. (630 aa)    
Predicted Functional Partners:
A0A4S8ILS6
F-box domain-containing protein.
   
 0.995
A0A4S8KAN1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.991
A0A4V4H6U5
Uncharacterized protein.
   
 0.990
A0A4S8JJD9
Uncharacterized protein.
   
 0.986
A0A4S8KCD1
Uncharacterized protein.
   
 
 0.979
A0A4S8IGK3
Uncharacterized protein.
   
 0.978
A0A4S8IMA7
Uncharacterized protein.
   
 
 0.977
A0A4S8JUH6
Uncharacterized protein.
  
0.977
A0A4S8JFZ9
RNA helicase.
  
0.974
A0A4S8IJW7
RNA helicase.
  
0.973
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.