STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8J6R2Uncharacterized protein. (195 aa)    
Predicted Functional Partners:
A0A4S8I689
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.589
A0A4S8JCL5
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.589
A0A4S8IVY4
Zf-rbx1 domain-containing protein.
    
 0.558
A0A4S8J6P0
Uncharacterized protein.
    
 0.558
A0A4S8KD10
Zf-rbx1 domain-containing protein.
    
 0.558
A0A4S8IPI4
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 
  0.484
A0A4S8IZV6
MPN domain-containing protein.
    
  0.434
A0A4S8I9B9
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.416
A0A4S8IA90
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.416
A0A4S8IGS4
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.416
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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