A0A4S8J7B5 protein (Musa balbisiana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4S8J7B5

Pribosyltran_N domain-containing protein. (384 aa)

Predicted Functional Partners:

A0A4S8K5Y6

0.949

A0A4S8K7G1

0.942

A0A4V4H5B5

0.931

A0A4V4H661

0.925

A0A4S8IF41

0.922

A0A4S8J4M0

0.915

A0A4S8KCP9

0.915

A0A4S8IFA1

0.911

A0A4S8IJT0

0.911

A0A4S8IL44

0.911

Your Current Organism:

Musa balbisiana

NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4S8IF41	A0A4S8IFA1	Uncharacterized protein.	Uncharacterized protein.	0.905
A0A4S8IF41	A0A4S8IJT0	Uncharacterized protein.	Uncharacterized protein.	0.753
A0A4S8IF41	A0A4S8IL44	Uncharacterized protein.	Uncharacterized protein.	0.753
A0A4S8IF41	A0A4S8J7B5	Uncharacterized protein.	Pribosyltran_N domain-containing protein.	0.922
A0A4S8IF41	A0A4S8K5Y6	Uncharacterized protein.	Uncharacterized protein.	0.498
A0A4S8IF41	A0A4S8K7G1	Uncharacterized protein.	OMPdecase domain-containing protein.	0.687
A0A4S8IF41	A0A4V4H661	Uncharacterized protein.	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	0.923
A0A4S8IFA1	A0A4S8IF41	Uncharacterized protein.	Uncharacterized protein.	0.905
A0A4S8IFA1	A0A4S8IJT0	Uncharacterized protein.	Uncharacterized protein.	0.753
A0A4S8IFA1	A0A4S8IL44	Uncharacterized protein.	Uncharacterized protein.	0.753
A0A4S8IFA1	A0A4S8J7B5	Uncharacterized protein.	Pribosyltran_N domain-containing protein.	0.911
A0A4S8IFA1	A0A4S8K5Y6	Uncharacterized protein.	Uncharacterized protein.	0.498
A0A4S8IFA1	A0A4S8K7G1	Uncharacterized protein.	OMPdecase domain-containing protein.	0.687
A0A4S8IFA1	A0A4V4H661	Uncharacterized protein.	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	0.908
A0A4S8IJT0	A0A4S8IF41	Uncharacterized protein.	Uncharacterized protein.	0.753
A0A4S8IJT0	A0A4S8IFA1	Uncharacterized protein.	Uncharacterized protein.	0.753
A0A4S8IJT0	A0A4S8J7B5	Uncharacterized protein.	Pribosyltran_N domain-containing protein.	0.911
A0A4S8IJT0	A0A4S8K5Y6	Uncharacterized protein.	Uncharacterized protein.	0.951
A0A4S8IL44	A0A4S8IF41	Uncharacterized protein.	Uncharacterized protein.	0.753
A0A4S8IL44	A0A4S8IFA1	Uncharacterized protein.	Uncharacterized protein.	0.753