A0A4S8JA97 protein (Musa balbisiana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4S8JA97

ML domain-containing protein. (173 aa)

Predicted Functional Partners:

A0A4S8I9J7

0.414

A0A4S8ICT1

0.414

A0A4S8IMF4

0.414

A0A4S8IVL7

0.414

A0A4S8J294

0.414

A0A4S8JBI4

0.414

A0A4S8JEB6

0.414

A0A4S8K444

0.414

A0A4S8K9F9

0.414

A0A4S8KA42

0.414

Your Current Organism:

Musa balbisiana

NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4S8I9J7	A0A4S8JA97	Uncharacterized protein.	ML domain-containing protein.	0.414
A0A4S8ICT1	A0A4S8JA97	HVA22-like protein.	ML domain-containing protein.	0.414
A0A4S8IMF4	A0A4S8JA97	HVA22-like protein.	ML domain-containing protein.	0.414
A0A4S8IVL7	A0A4S8JA97	Uncharacterized protein.	ML domain-containing protein.	0.414
A0A4S8J294	A0A4S8JA97	HVA22-like protein.	ML domain-containing protein.	0.414
A0A4S8JA97	A0A4S8I9J7	ML domain-containing protein.	Uncharacterized protein.	0.414
A0A4S8JA97	A0A4S8ICT1	ML domain-containing protein.	HVA22-like protein.	0.414
A0A4S8JA97	A0A4S8IMF4	ML domain-containing protein.	HVA22-like protein.	0.414
A0A4S8JA97	A0A4S8IVL7	ML domain-containing protein.	Uncharacterized protein.	0.414
A0A4S8JA97	A0A4S8J294	ML domain-containing protein.	HVA22-like protein.	0.414
A0A4S8JA97	A0A4S8JBI4	ML domain-containing protein.	BHLH domain-containing protein.	0.414
A0A4S8JA97	A0A4S8JEB6	ML domain-containing protein.	HVA22-like protein.	0.414
A0A4S8JA97	A0A4S8K444	ML domain-containing protein.	BHLH domain-containing protein.	0.414
A0A4S8JA97	A0A4S8K9F9	ML domain-containing protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.414
A0A4S8JA97	A0A4S8KA42	ML domain-containing protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.414
A0A4S8JBI4	A0A4S8JA97	BHLH domain-containing protein.	ML domain-containing protein.	0.414
A0A4S8JEB6	A0A4S8JA97	HVA22-like protein.	ML domain-containing protein.	0.414
A0A4S8K444	A0A4S8JA97	BHLH domain-containing protein.	ML domain-containing protein.	0.414
A0A4S8K9F9	A0A4S8JA97	GRAS domain-containing protein; Belongs to the GRAS family.	ML domain-containing protein.	0.414
A0A4S8KA42	A0A4S8JA97	GRAS domain-containing protein; Belongs to the GRAS family.	ML domain-containing protein.	0.414