A0A4S8JBI1 protein (Musa balbisiana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4S8JBI1

Uncharacterized protein. (882 aa)

Predicted Functional Partners:

A0A4S8JUK2

0.865

A0A4S8KEX1

0.862

A0A4S8KC63

0.673

A0A4S8JUG1

0.634

A0A4S8KFU7

0.634

A0A4V4HAB7

0.634

A0A4S8K4T9

0.569

A0A4S8IET3

0.557

A0A4S8JH14

0.529

A0A4S8IT19

0.501

Your Current Organism:

Musa balbisiana

NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4S8IET3	A0A4S8JBI1	Uncharacterized protein.	Uncharacterized protein.	0.557
A0A4S8IET3	A0A4S8JH14	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.613
A0A4S8IT19	A0A4S8JBI1	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.501
A0A4S8IT19	A0A4S8K4T9	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.524
A0A4S8JBI1	A0A4S8IET3	Uncharacterized protein.	Uncharacterized protein.	0.557
A0A4S8JBI1	A0A4S8IT19	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.501
A0A4S8JBI1	A0A4S8JH14	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.529
A0A4S8JBI1	A0A4S8JUG1	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.634
A0A4S8JBI1	A0A4S8JUK2	Uncharacterized protein.	Uncharacterized protein.	0.865
A0A4S8JBI1	A0A4S8K4T9	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.569
A0A4S8JBI1	A0A4S8KC63	Uncharacterized protein.	EF-hand domain-containing protein.	0.673
A0A4S8JBI1	A0A4S8KEX1	Uncharacterized protein.	Cyclic nucleotide-binding domain-containing protein.	0.862
A0A4S8JBI1	A0A4S8KFU7	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.	0.634
A0A4S8JBI1	A0A4V4HAB7	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.634
A0A4S8JH14	A0A4S8IET3	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.613
A0A4S8JH14	A0A4S8JBI1	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.529
A0A4S8JH14	A0A4S8K4T9	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.617
A0A4S8JUG1	A0A4S8JBI1	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.634
A0A4S8JUK2	A0A4S8JBI1	Uncharacterized protein.	Uncharacterized protein.	0.865
A0A4S8JUK2	A0A4S8KC63	Uncharacterized protein.	EF-hand domain-containing protein.	0.638