STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8JP74Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (141 aa)    
Predicted Functional Partners:
A0A4S8ICT2
Uncharacterized protein.
    
 0.974
A0A4S8JF91
Uncharacterized protein.
    
 0.974
A0A4S8JV77
Uncharacterized protein.
    
 0.974
A0A4S8JFZ6
Uncharacterized protein.
    
 0.968
A0A4S8I7B2
Uncharacterized protein.
    
 0.966
A0A4S8J0N9
Uncharacterized protein.
   
 0.966
A0A4V4H311
TAFII28 domain-containing protein.
    
 0.966
A0A4S8IH79
CYCLIN domain-containing protein; Belongs to the cyclin family.
   
 0.963
A0A4S8KA61
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
   
 0.962
A0A4V4H9R0
HTH myb-type domain-containing protein.
   
 0.962
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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